Further reading¶
Wasserman, W., Sandelin, A. Applied bioinformatics for the identification of regulatory elements. Nat Rev Genet 5, 276–287 (2004).
Park, P. ChIP–seq: advantages and challenges of a maturing technology. Nat Rev Genet 10, 669–680 (2009).
Bailey T, Krajewski P, Ladunga I, Lefebvre C, Li Q, et al. (2013) Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data. PLOS Computational Biology 9(11): e1003326.
Zhang, Y., Liu, T., Meyer, C.A. et al. Model-based Analysis of ChIP-Seq (MACS). Genome Biol 9, R137 (2008).
Carroll TS, Liang Z, Salama R, Stark R and Santiago Id (2014). “Impact of artefact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.” Frontiers in Genetics 10, 5:75.
Ma, W., Noble, W. & Bailey, T. Motif-based analysis of large nucleotide data sets using MEME-ChIP. Nat Protoc 9, 1428–1450 (2014).
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